Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.4■□□□□ 0.54
Nr1d1Q3UV55 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1d1Q3UV55 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1d1Q3UV55 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1d1Q3UV55 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nr1d1Q3UV55 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nr1d1Q3UV55 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Idnk-204ENSMUST00000226010 1898 ntBASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.39■□□□□ 0.53
Nr1d1Q3UV55 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1d1Q3UV55 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Mir7071-201ENSMUST00000184847 69 ntBASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Gm8520-201ENSMUST00000186517 868 ntBASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nr1d1Q3UV55 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Gm38205-201ENSMUST00000192243 258 ntBASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Gm6365-201ENSMUST00000054711 744 ntBASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.36■□□□□ 0.53
Nr1d1Q3UV55 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nr1d1Q3UV55 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nr1d1Q3UV55 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms