Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Gm29791-202ENSMUST00000207888 369 ntBASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smcr8Q3UMB5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.71■□□□□ 0.59
Smcr8Q3UMB5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smcr8Q3UMB5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smcr8Q3UMB5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.68■□□□□ 0.58
Smcr8Q3UMB5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smcr8Q3UMB5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms