Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.68■□□□□ 0.9
Col5a2Q3U962 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.68■□□□□ 0.9
Col5a2Q3U962 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a2Q3U962 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col5a2Q3U962 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.67■□□□□ 0.9
Col5a2Q3U962 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.67■□□□□ 0.9
Col5a2Q3U962 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Rps4l-201ENSMUST00000071745 943 ntBASIC20.67■□□□□ 0.9
Col5a2Q3U962 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Col5a2Q3U962 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.67■□□□□ 0.9
Col5a2Q3U962 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col5a2Q3U962 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.66■□□□□ 0.9
Col5a2Q3U962 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.66■□□□□ 0.9
Col5a2Q3U962 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col5a2Q3U962 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Gm2651-201ENSMUST00000203560 838 ntBASIC20.66■□□□□ 0.9
Col5a2Q3U962 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Col5a2Q3U962 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.65■□□□□ 0.9
Col5a2Q3U962 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Col5a2Q3U962 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col5a2Q3U962 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col5a2Q3U962 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Gm11452-201ENSMUST00000122376 690 ntBASIC20.64■□□□□ 0.89
Col5a2Q3U962 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.64■□□□□ 0.89
Col5a2Q3U962 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col5a2Q3U962 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Mir8112-201ENSMUST00000184382 131 ntBASIC20.63■□□□□ 0.89
Col5a2Q3U962 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Col5a2Q3U962 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Col5a2Q3U962 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.62■□□□□ 0.89
Col5a2Q3U962 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col5a2Q3U962 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.62■□□□□ 0.89
Col5a2Q3U962 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms