Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf1Q07802 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf1Q07802 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf1Q07802 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf1Q07802 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ebf1Q07802 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ebf1Q07802 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Gm22697-201ENSMUST00000175194 63 ntBASIC17.6■□□□□ 0.41
Ebf1Q07802 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ebf1Q07802 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.6■□□□□ 0.41
Ebf1Q07802 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ebf1Q07802 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ebf1Q07802 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.59■□□□□ 0.41
Ebf1Q07802 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ebf1Q07802 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.59■□□□□ 0.41
Ebf1Q07802 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ebf1Q07802 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Gm25016-201ENSMUST00000158399 131 ntBASIC17.59■□□□□ 0.41
Ebf1Q07802 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf1Q07802 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.58■□□□□ 0.41
Ebf1Q07802 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf1Q07802 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf1Q07802 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf1Q07802 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ebf1Q07802 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Gm14859-201ENSMUST00000117752 357 ntBASIC17.58■□□□□ 0.4
Ebf1Q07802 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Gm4974-201ENSMUST00000209974 875 ntBASIC17.58■□□□□ 0.4
Ebf1Q07802 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ebf1Q07802 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ebf1Q07802 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf1Q07802 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ebf1Q07802 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.57■□□□□ 0.4
Ebf1Q07802 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.57■□□□□ 0.4
Ebf1Q07802 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ebf1Q07802 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ebf1Q07802 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.57■□□□□ 0.4
Ebf1Q07802 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.57■□□□□ 0.4
Ebf1Q07802 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf1Q07802 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf1Q07802 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.56■□□□□ 0.4
Ebf1Q07802 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ebf1Q07802 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.56■□□□□ 0.4
Ebf1Q07802 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.56■□□□□ 0.4
Ebf1Q07802 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.56■□□□□ 0.4
Ebf1Q07802 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf1Q07802 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ebf1Q07802 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ebf1Q07802 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ebf1Q07802 Gm9103-201ENSMUST00000119371 405 ntBASIC17.56■□□□□ 0.4
Ebf1Q07802 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.56■□□□□ 0.4
Ebf1Q07802 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf1Q07802 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf1Q07802 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf1Q07802 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.56■□□□□ 0.4
Ebf1Q07802 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ebf1Q07802 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf1Q07802 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms