Protein–RNA interactions for Protein: P97358

Taf1b, TATA box-binding protein-associated factor RNA polymerase I subunit B, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1bP97358 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Taf1bP97358 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.37■□□□□ 0.69
Taf1bP97358 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Gm17661-201ENSMUST00000170317 270 ntBASIC19.37■□□□□ 0.69
Taf1bP97358 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.37■□□□□ 0.69
Taf1bP97358 Gm18101-201ENSMUST00000215769 548 ntBASIC19.37■□□□□ 0.69
Taf1bP97358 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Taf1bP97358 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Taf1bP97358 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Taf1bP97358 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.37■□□□□ 0.69
Taf1bP97358 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Taf1bP97358 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Taf1bP97358 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Taf1bP97358 Gm13474-201ENSMUST00000122466 815 ntBASIC19.36■□□□□ 0.69
Taf1bP97358 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Taf1bP97358 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.36■□□□□ 0.69
Taf1bP97358 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Taf1bP97358 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Taf1bP97358 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Taf1bP97358 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Taf1bP97358 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.36■□□□□ 0.69
Taf1bP97358 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Taf1bP97358 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.35■□□□□ 0.69
Taf1bP97358 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.35■□□□□ 0.69
Taf1bP97358 Gm6345-202ENSMUST00000180900 204 ntBASIC19.35■□□□□ 0.69
Taf1bP97358 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Taf1bP97358 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Taf1bP97358 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Taf1bP97358 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Taf1bP97358 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Taf1bP97358 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Taf1bP97358 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Taf1bP97358 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.33■□□□□ 0.69
Taf1bP97358 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.33■□□□□ 0.69
Taf1bP97358 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Taf1bP97358 AA414768-201ENSMUST00000121924 1257 ntBASIC19.33■□□□□ 0.68
Taf1bP97358 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Taf1bP97358 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.33■□□□□ 0.68
Taf1bP97358 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.33■□□□□ 0.68
Taf1bP97358 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Taf1bP97358 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Taf1bP97358 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.33■□□□□ 0.68
Taf1bP97358 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Taf1bP97358 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Taf1bP97358 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.32■□□□□ 0.68
Taf1bP97358 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.32■□□□□ 0.68
Taf1bP97358 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Taf1bP97358 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Taf1bP97358 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Taf1bP97358 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Taf1bP97358 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Taf1bP97358 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Taf1bP97358 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Taf1bP97358 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms