Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Pdlim4P70271 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdlim4P70271 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim4P70271 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim4P70271 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.48□□□□□ -0.09
Pdlim4P70271 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim4P70271 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pdlim4P70271 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Gm18025-201ENSMUST00000221733 862 ntBASIC14.48□□□□□ -0.09
Pdlim4P70271 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim4P70271 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.48□□□□□ -0.09
Pdlim4P70271 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim4P70271 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pdlim4P70271 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdlim4P70271 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.47□□□□□ -0.09
Pdlim4P70271 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.47□□□□□ -0.09
Pdlim4P70271 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdlim4P70271 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim4P70271 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim4P70271 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pdlim4P70271 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdlim4P70271 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim4P70271 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pdlim4P70271 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim4P70271 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pdlim4P70271 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Pdlim4P70271 Gm42545-201ENSMUST00000202755 922 ntBASIC14.46□□□□□ -0.09
Pdlim4P70271 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pdlim4P70271 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Pdlim4P70271 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pdlim4P70271 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim4P70271 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pdlim4P70271 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdlim4P70271 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim4P70271 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pdlim4P70271 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim4P70271 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim4P70271 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdlim4P70271 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pdlim4P70271 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.45□□□□□ -0.1
Pdlim4P70271 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Gm12382-201ENSMUST00000122005 922 ntBASIC14.45□□□□□ -0.1
Pdlim4P70271 Gm10698-201ENSMUST00000182663 604 ntBASIC14.45□□□□□ -0.1
Pdlim4P70271 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Gm29791-202ENSMUST00000207888 369 ntBASIC14.45□□□□□ -0.1
Pdlim4P70271 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.45□□□□□ -0.1
Pdlim4P70271 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pdlim4P70271 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdlim4P70271 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.45□□□□□ -0.1
Pdlim4P70271 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pdlim4P70271 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdlim4P70271 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms