Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.16■□□□□ 0.34
Traf6P70196 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Traf6P70196 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Traf6P70196 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Traf6P70196 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Traf6P70196 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Traf6P70196 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Traf6P70196 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.15■□□□□ 0.34
Traf6P70196 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Mir2861-201ENSMUST00000175539 82 ntBASIC17.15■□□□□ 0.34
Traf6P70196 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.15■□□□□ 0.34
Traf6P70196 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.15■□□□□ 0.34
Traf6P70196 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.15■□□□□ 0.34
Traf6P70196 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.15■□□□□ 0.34
Traf6P70196 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.15■□□□□ 0.34
Traf6P70196 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Traf6P70196 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.15■□□□□ 0.34
Traf6P70196 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Traf6P70196 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Traf6P70196 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Traf6P70196 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Traf6P70196 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.14■□□□□ 0.33
Traf6P70196 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Traf6P70196 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf6P70196 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.13■□□□□ 0.33
Traf6P70196 Gm29791-202ENSMUST00000207888 369 ntBASIC17.13■□□□□ 0.33
Traf6P70196 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.13■□□□□ 0.33
Traf6P70196 Mtag2-201ENSMUST00000058665 714 ntBASIC17.13■□□□□ 0.33
Traf6P70196 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Traf6P70196 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.13■□□□□ 0.33
Traf6P70196 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Traf6P70196 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf6P70196 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Traf6P70196 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Traf6P70196 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
Traf6P70196 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Traf6P70196 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Traf6P70196 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Gm11927-201ENSMUST00000118472 759 ntBASIC17.12■□□□□ 0.33
Traf6P70196 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Traf6P70196 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Traf6P70196 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.12■□□□□ 0.33
Traf6P70196 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Traf6P70196 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Flg-201ENSMUST00000050758 1488 ntBASIC17.12■□□□□ 0.33
Traf6P70196 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf6P70196 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf6P70196 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf6P70196 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Traf6P70196 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.11■□□□□ 0.33
Traf6P70196 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf6P70196 Mir8112-201ENSMUST00000184382 131 ntBASIC17.11■□□□□ 0.33
Traf6P70196 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.11■□□□□ 0.33
Traf6P70196 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms