Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.26■□□□□ 0.03
GdnfP48540 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GdnfP48540 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
GdnfP48540 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.26■□□□□ 0.03
GdnfP48540 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GdnfP48540 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.25■□□□□ 0.03
GdnfP48540 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.25■□□□□ 0.03
GdnfP48540 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.25■□□□□ 0.03
GdnfP48540 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GdnfP48540 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GdnfP48540 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GdnfP48540 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
GdnfP48540 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.24■□□□□ 0.03
GdnfP48540 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GdnfP48540 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.23■□□□□ 0.03
GdnfP48540 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
GdnfP48540 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.23■□□□□ 0.03
GdnfP48540 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GdnfP48540 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.23■□□□□ 0.03
GdnfP48540 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.23■□□□□ 0.03
GdnfP48540 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.23■□□□□ 0.03
GdnfP48540 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.23■□□□□ 0.03
GdnfP48540 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GdnfP48540 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GdnfP48540 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GdnfP48540 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GdnfP48540 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.22■□□□□ 0.03
GdnfP48540 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
GdnfP48540 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GdnfP48540 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GdnfP48540 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.22■□□□□ 0.03
GdnfP48540 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GdnfP48540 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Gm13148-201ENSMUST00000118892 745 ntBASIC15.22■□□□□ 0.03
GdnfP48540 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.22■□□□□ 0.03
GdnfP48540 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
GdnfP48540 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
GdnfP48540 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GdnfP48540 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GdnfP48540 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GdnfP48540 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GdnfP48540 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GdnfP48540 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GdnfP48540 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms