Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vps4bP46467 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vps4bP46467 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vps4bP46467 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vps4bP46467 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Vps4bP46467 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Vps4bP46467 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.68■□□□□ 0.42
Vps4bP46467 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Vps4bP46467 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vps4bP46467 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Vps4bP46467 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Vps4bP46467 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vps4bP46467 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.67■□□□□ 0.42
Vps4bP46467 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4bP46467 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4bP46467 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Vps4bP46467 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.67■□□□□ 0.42
Vps4bP46467 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Vps4bP46467 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4bP46467 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Vps4bP46467 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.67■□□□□ 0.42
Vps4bP46467 Gm5408-201ENSMUST00000197998 747 ntBASIC17.67■□□□□ 0.42
Vps4bP46467 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.67■□□□□ 0.42
Vps4bP46467 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.67■□□□□ 0.42
Vps4bP46467 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4bP46467 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4bP46467 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vps4bP46467 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Vps4bP46467 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.66■□□□□ 0.42
Vps4bP46467 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Mir6349-201ENSMUST00000184059 97 ntBASIC17.66■□□□□ 0.42
Vps4bP46467 Gm8520-201ENSMUST00000186517 868 ntBASIC17.66■□□□□ 0.42
Vps4bP46467 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.66■□□□□ 0.42
Vps4bP46467 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Vps4bP46467 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vps4bP46467 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vps4bP46467 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vps4bP46467 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 Gm2559-201ENSMUST00000201323 363 ntBASIC17.65■□□□□ 0.42
Vps4bP46467 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.65■□□□□ 0.42
Vps4bP46467 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vps4bP46467 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vps4bP46467 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vps4bP46467 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vps4bP46467 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.64■□□□□ 0.41
Vps4bP46467 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.64■□□□□ 0.41
Vps4bP46467 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Gm11643-201ENSMUST00000119578 864 ntBASIC17.64■□□□□ 0.41
Vps4bP46467 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.64■□□□□ 0.41
Vps4bP46467 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vps4bP46467 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Vps4bP46467 Gm4968-201ENSMUST00000071458 858 ntBASIC17.64■□□□□ 0.41
Vps4bP46467 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vps4bP46467 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vps4bP46467 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms