Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.68■□□□□ 0.26
Sox18P43680 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Gm19891-201ENSMUST00000189771 303 ntBASIC16.68■□□□□ 0.26
Sox18P43680 Gm7213-201ENSMUST00000215977 950 ntBASIC16.68■□□□□ 0.26
Sox18P43680 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.68■□□□□ 0.26
Sox18P43680 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sox18P43680 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.67■□□□□ 0.26
Sox18P43680 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.67■□□□□ 0.26
Sox18P43680 Birc2-201ENSMUST00000054878 378 ntBASIC16.67■□□□□ 0.26
Sox18P43680 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Sox18P43680 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox18P43680 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.66■□□□□ 0.26
Sox18P43680 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sox18P43680 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Sox18P43680 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Sox18P43680 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.66■□□□□ 0.26
Sox18P43680 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.66■□□□□ 0.26
Sox18P43680 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sox18P43680 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sox18P43680 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox18P43680 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox18P43680 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox18P43680 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sox18P43680 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox18P43680 Mir8098-201ENSMUST00000184011 137 ntBASIC16.65■□□□□ 0.26
Sox18P43680 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC16.65■□□□□ 0.26
Sox18P43680 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Sox18P43680 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Sox18P43680 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox18P43680 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.65■□□□□ 0.26
Sox18P43680 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox18P43680 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox18P43680 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sox18P43680 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox18P43680 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox18P43680 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox18P43680 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox18P43680 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox18P43680 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox18P43680 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.64■□□□□ 0.25
Sox18P43680 Gm37935-201ENSMUST00000192012 982 ntBASIC16.64■□□□□ 0.25
Sox18P43680 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox18P43680 Gm5864-201ENSMUST00000202263 970 ntBASIC16.64■□□□□ 0.25
Sox18P43680 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sox18P43680 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox18P43680 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.64■□□□□ 0.25
Sox18P43680 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox18P43680 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox18P43680 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox18P43680 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms