Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Gm14859-201ENSMUST00000117752 357 ntBASIC14.44□□□□□ -0.1
Abca1P41233 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Abca1P41233 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Abca1P41233 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Abca1P41233 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Gm12085-201ENSMUST00000119263 940 ntBASIC14.43□□□□□ -0.1
Abca1P41233 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Abca1P41233 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.43□□□□□ -0.1
Abca1P41233 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.43□□□□□ -0.1
Abca1P41233 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Abca1P41233 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Abca1P41233 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Abca1P41233 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.43□□□□□ -0.1
Abca1P41233 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Abca1P41233 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Abca1P41233 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Abca1P41233 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.42□□□□□ -0.1
Abca1P41233 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.42□□□□□ -0.1
Abca1P41233 Gm5587-201ENSMUST00000206270 674 ntBASIC14.42□□□□□ -0.1
Abca1P41233 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Abca1P41233 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Abca1P41233 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Abca1P41233 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Abca1P41233 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Abca1P41233 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Abca1P41233 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Abca1P41233 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.41□□□□□ -0.1
Abca1P41233 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Abca1P41233 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Abca1P41233 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.41□□□□□ -0.1
Abca1P41233 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.41□□□□□ -0.1
Abca1P41233 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Abca1P41233 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.41□□□□□ -0.1
Abca1P41233 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Abca1P41233 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Abca1P41233 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.41□□□□□ -0.1
Abca1P41233 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.4□□□□□ -0.1
Abca1P41233 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.4□□□□□ -0.1
Abca1P41233 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.4□□□□□ -0.1
Abca1P41233 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.4□□□□□ -0.1
Abca1P41233 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.4□□□□□ -0.1
Abca1P41233 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Abca1P41233 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Abca1P41233 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Abca1P41233 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Abca1P41233 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Abca1P41233 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Abca1P41233 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms