Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cxcl12P40224 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Cxcl12P40224 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.95■□□□□ 0.46
Cxcl12P40224 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.95■□□□□ 0.46
Cxcl12P40224 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.95■□□□□ 0.46
Cxcl12P40224 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.95■□□□□ 0.46
Cxcl12P40224 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Cxcl12P40224 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.95■□□□□ 0.46
Cxcl12P40224 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cxcl12P40224 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cxcl12P40224 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.94■□□□□ 0.46
Cxcl12P40224 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cxcl12P40224 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.94■□□□□ 0.46
Cxcl12P40224 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Tgds-204ENSMUST00000228543 1594 ntBASIC17.94■□□□□ 0.46
Cxcl12P40224 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.94■□□□□ 0.46
Cxcl12P40224 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cxcl12P40224 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.94■□□□□ 0.46
Cxcl12P40224 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
Cxcl12P40224 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cxcl12P40224 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl12P40224 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl12P40224 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.93■□□□□ 0.46
Cxcl12P40224 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl12P40224 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.93■□□□□ 0.46
Cxcl12P40224 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Cxcl12P40224 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl12P40224 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Cxcl12P40224 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl12P40224 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cxcl12P40224 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cxcl12P40224 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Cxcl12P40224 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Cxcl12P40224 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.92■□□□□ 0.46
Cxcl12P40224 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.92■□□□□ 0.46
Cxcl12P40224 Gm2651-201ENSMUST00000203560 838 ntBASIC17.92■□□□□ 0.46
Cxcl12P40224 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Cxcl12P40224 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Cxcl12P40224 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cxcl12P40224 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.91■□□□□ 0.46
Cxcl12P40224 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.91■□□□□ 0.46
Cxcl12P40224 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.91■□□□□ 0.46
Cxcl12P40224 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.91■□□□□ 0.46
Cxcl12P40224 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl12P40224 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cxcl12P40224 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl12P40224 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl12P40224 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl12P40224 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cxcl12P40224 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.9■□□□□ 0.46
Cxcl12P40224 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl12P40224 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl12P40224 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cxcl12P40224 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl12P40224 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms