Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.13■□□□□ 0.33
Hoxa4P06798 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.13■□□□□ 0.33
Hoxa4P06798 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hoxa4P06798 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxa4P06798 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.12■□□□□ 0.33
Hoxa4P06798 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa4P06798 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Hoxa4P06798 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.12■□□□□ 0.33
Hoxa4P06798 Gm15565-201ENSMUST00000118890 427 ntBASIC17.12■□□□□ 0.33
Hoxa4P06798 Gm11539-201ENSMUST00000119837 557 ntBASIC17.12■□□□□ 0.33
Hoxa4P06798 Gm13436-201ENSMUST00000120418 567 ntBASIC17.12■□□□□ 0.33
Hoxa4P06798 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hoxa4P06798 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hoxa4P06798 Gm7791-201ENSMUST00000219066 539 ntBASIC17.12■□□□□ 0.33
Hoxa4P06798 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hoxa4P06798 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxa4P06798 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.11■□□□□ 0.33
Hoxa4P06798 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.11■□□□□ 0.33
Hoxa4P06798 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.11■□□□□ 0.33
Hoxa4P06798 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hoxa4P06798 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxa4P06798 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Hoxa4P06798 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hoxa4P06798 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hoxa4P06798 Gm43799-201ENSMUST00000201845 579 ntBASIC17.1■□□□□ 0.33
Hoxa4P06798 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Hoxa4P06798 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.1■□□□□ 0.33
Hoxa4P06798 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxa4P06798 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hoxa4P06798 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Gm6433-201ENSMUST00000118634 875 ntBASIC17.09■□□□□ 0.33
Hoxa4P06798 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxa4P06798 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hoxa4P06798 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxa4P06798 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxa4P06798 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.08■□□□□ 0.33
Hoxa4P06798 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxa4P06798 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms