Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sh2d1aO88890 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sh2d1aO88890 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Gm12933-201ENSMUST00000120203 872 ntBASIC12.33□□□□□ -0.44
Sh2d1aO88890 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.33□□□□□ -0.44
Sh2d1aO88890 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sh2d1aO88890 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Idnk-204ENSMUST00000226010 1898 ntBASIC12.32□□□□□ -0.44
Sh2d1aO88890 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.32□□□□□ -0.44
Sh2d1aO88890 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.32□□□□□ -0.44
Sh2d1aO88890 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sh2d1aO88890 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sh2d1aO88890 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sh2d1aO88890 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms