Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb2O55203 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb2O55203 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb2O55203 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ldb2O55203 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ldb2O55203 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Ldb2O55203 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ldb2O55203 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.33■□□□□ 0.36
Ldb2O55203 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ldb2O55203 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb2O55203 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ldb2O55203 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ldb2O55203 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.32■□□□□ 0.36
Ldb2O55203 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb2O55203 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb2O55203 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.32■□□□□ 0.36
Ldb2O55203 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb2O55203 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb2O55203 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ldb2O55203 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.31■□□□□ 0.36
Ldb2O55203 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.31■□□□□ 0.36
Ldb2O55203 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.31■□□□□ 0.36
Ldb2O55203 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.31■□□□□ 0.36
Ldb2O55203 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.31■□□□□ 0.36
Ldb2O55203 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.31■□□□□ 0.36
Ldb2O55203 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb2O55203 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.31■□□□□ 0.36
Ldb2O55203 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb2O55203 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb2O55203 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ldb2O55203 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.3■□□□□ 0.36
Ldb2O55203 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb2O55203 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb2O55203 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Ldb2O55203 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb2O55203 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Ldb2O55203 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb2O55203 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb2O55203 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.29■□□□□ 0.36
Ldb2O55203 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.29■□□□□ 0.36
Ldb2O55203 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ldb2O55203 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ldb2O55203 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb2O55203 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ldb2O55203 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ldb2O55203 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.28■□□□□ 0.36
Ldb2O55203 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Ldb2O55203 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Gm24841-201ENSMUST00000158676 357 ntBASIC17.28■□□□□ 0.36
Ldb2O55203 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.28■□□□□ 0.36
Ldb2O55203 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ldb2O55203 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb2O55203 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb2O55203 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ldb2O55203 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb2O55203 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb2O55203 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb2O55203 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms