Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Slc1a6O35544 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a6O35544 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Slc1a6O35544 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc1a6O35544 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc1a6O35544 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.18■□□□□ 0.34
Slc1a6O35544 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.18■□□□□ 0.34
Slc1a6O35544 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.18■□□□□ 0.34
Slc1a6O35544 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.18■□□□□ 0.34
Slc1a6O35544 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc1a6O35544 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a6O35544 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Gm13216-201ENSMUST00000117145 591 ntBASIC17.17■□□□□ 0.34
Slc1a6O35544 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.17■□□□□ 0.34
Slc1a6O35544 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a6O35544 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc1a6O35544 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Zfp783-201ENSMUST00000095946 670 ntBASIC17.16■□□□□ 0.34
Slc1a6O35544 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.16■□□□□ 0.34
Slc1a6O35544 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a6O35544 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc1a6O35544 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.15■□□□□ 0.34
Slc1a6O35544 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.15■□□□□ 0.34
Slc1a6O35544 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc1a6O35544 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a6O35544 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.15■□□□□ 0.34
Slc1a6O35544 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Slc1a6O35544 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc1a6O35544 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc1a6O35544 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Slc1a6O35544 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.14■□□□□ 0.33
Slc1a6O35544 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Gm2399-201ENSMUST00000104944 225 ntBASIC17.14■□□□□ 0.33
Slc1a6O35544 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.14■□□□□ 0.33
Slc1a6O35544 Gm10033-202ENSMUST00000211874 928 ntBASIC17.14■□□□□ 0.33
Slc1a6O35544 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.14■□□□□ 0.33
Slc1a6O35544 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.14■□□□□ 0.33
Slc1a6O35544 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc1a6O35544 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc1a6O35544 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Slc1a6O35544 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc1a6O35544 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms