Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.68■□□□□ 0.58
Usp35M0QWN7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.68■□□□□ 0.58
Usp35M0QWN7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Usp35M0QWN7 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.67■□□□□ 0.58
Usp35M0QWN7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Odf3b-204ENSMUST00000227834 930 ntBASIC18.67■□□□□ 0.58
Usp35M0QWN7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp35M0QWN7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.66■□□□□ 0.58
Usp35M0QWN7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Gm30025-201ENSMUST00000218555 728 ntBASIC18.66■□□□□ 0.58
Usp35M0QWN7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp35M0QWN7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.65■□□□□ 0.58
Usp35M0QWN7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Timm23-208ENSMUST00000226683 750 ntBASIC18.65■□□□□ 0.58
Usp35M0QWN7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp35M0QWN7 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.64■□□□□ 0.58
Usp35M0QWN7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp35M0QWN7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.64■□□□□ 0.58
Usp35M0QWN7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.64■□□□□ 0.57
Usp35M0QWN7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.64■□□□□ 0.57
Usp35M0QWN7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp35M0QWN7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp35M0QWN7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp35M0QWN7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms