Protein–RNA interactions for Protein: K7N6K7

Sirpb1c, Signal-regulatory protein beta 1C, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1cK7N6K7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1cK7N6K7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sirpb1cK7N6K7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1cK7N6K7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sirpb1cK7N6K7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sirpb1cK7N6K7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1cK7N6K7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sirpb1cK7N6K7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms