Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav13d-3J3QMG8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav13d-3J3QMG8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Gm13168-201ENSMUST00000121771 632 ntBASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13d-3J3QMG8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13d-3J3QMG8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13d-3J3QMG8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Gm10517-202ENSMUST00000192970 758 ntBASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.3■□□□□ 0.04
Trav13d-3J3QMG8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Gm4974-201ENSMUST00000209974 875 ntBASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-3J3QMG8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-3J3QMG8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-3J3QMG8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.28■□□□□ 0.04
Trav13d-3J3QMG8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trav13d-3J3QMG8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms