Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Gm715-201ENSMUST00000117865 831 ntBASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf4lE9Q2N0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Gm24841-201ENSMUST00000158676 357 ntBASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf4lE9Q2N0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf4lE9Q2N0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Gm12085-201ENSMUST00000119263 940 ntBASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Cpsf4lE9Q2N0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cpsf4lE9Q2N0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms