Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Gm18671-201ENSMUST00000214826 683 ntBASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm11127A7VMS2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm11127A7VMS2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Gm42642-201ENSMUST00000200683 355 ntBASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Gm7514-201ENSMUST00000209475 934 ntBASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Gm5874-201ENSMUST00000096101 508 ntBASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm11127A7VMS2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.42■□□□□ 0.06
Gm11127A7VMS2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm11127A7VMS2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm11127A7VMS2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms