Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12d-1A0N8R0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Gm2399-201ENSMUST00000104944 225 ntBASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav12d-1A0N8R0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-1A0N8R0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-1A0N8R0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav12d-1A0N8R0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-1A0N8R0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-1A0N8R0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-1A0N8R0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav12d-1A0N8R0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Gm10033-202ENSMUST00000211874 928 ntBASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Zfp783-201ENSMUST00000095946 670 ntBASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav12d-1A0N8R0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Gm18671-201ENSMUST00000214826 683 ntBASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav12d-1A0N8R0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-1A0N8R0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-1A0N8R0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-1A0N8R0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-1A0N8R0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14□□□□□ -0.17
Trav12d-1A0N8R0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav12d-1A0N8R0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav12d-1A0N8R0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms