Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm26833-201ENSMUST00000180899 440 ntBASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav3n-3A0A0G2JEM0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms