Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm42642-201ENSMUST00000200683 355 ntBASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 AV356131-201ENSMUST00000206201 750 ntBASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm6365-201ENSMUST00000054711 744 ntBASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Flg-201ENSMUST00000050758 1488 ntBASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv16A0A0B4J1H3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm6211-202ENSMUST00000167849 925 ntBASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv16A0A0B4J1H3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm7291-201ENSMUST00000199147 382 ntBASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Gm44549-201ENSMUST00000208351 577 ntBASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trbv16A0A0B4J1H3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Mir2861-201ENSMUST00000175539 82 ntBASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.61□□□□□ -0.39
Trbv16A0A0B4J1H3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms