Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv1A0A0B4J1G7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv1A0A0B4J1G7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 AV356131-201ENSMUST00000206201 750 ntBASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv1A0A0B4J1G7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv1A0A0B4J1G7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Gm7514-201ENSMUST00000209475 934 ntBASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv1A0A0B4J1G7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms