Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm13836-201ENSMUST00000121159 501 ntBASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Tgds-204ENSMUST00000228543 1594 ntBASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Dio3-201ENSMUST00000097228 1449 ntBASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Gm7977-201ENSMUST00000193787 748 ntBASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sirpb1bA0A0A6YXN8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms