Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.08■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm18101-201ENSMUST00000215769 548 ntBASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.08■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm22697-201ENSMUST00000175194 63 ntBASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm7370-201ENSMUST00000219471 767 ntBASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-43A0A0A6YXN5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms