Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm29791-202ENSMUST00000207888 369 ntBASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.26□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mir8112-201ENSMUST00000184382 131 ntBASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-2-dv6-2A0A075B650 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms