Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm11539-201ENSMUST00000119837 557 ntBASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm13436-201ENSMUST00000120418 567 ntBASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm13559-201ENSMUST00000120476 863 ntBASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5-1A0A075B5Z7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm7638-201ENSMUST00000121348 967 ntBASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm9731-201ENSMUST00000209480 747 ntBASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav5-1A0A075B5Z7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav5-1A0A075B5Z7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm2274-201ENSMUST00000184539 609 ntBASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm8969-201ENSMUST00000199694 526 ntBASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav5-1A0A075B5Z7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5-1A0A075B5Z7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav5-1A0A075B5Z7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav5-1A0A075B5Z7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav5-1A0A075B5Z7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms