Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox9Q04887 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm17929-201ENSMUST00000186851 627 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm29495-201ENSMUST00000189319 664 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm36998-201ENSMUST00000193205 704 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm10048-201ENSMUST00000194196 372 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm45530-201ENSMUST00000211658 225 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.3□□□□□ -1.56
Sox9Q04887 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox9Q04887 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox9Q04887 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox9Q04887 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Gm14785-201ENSMUST00000120185 539 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm12819-201ENSMUST00000122223 629 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Gm22613-201ENSMUST00000122679 292 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm5252-201ENSMUST00000189030 909 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm28779-201ENSMUST00000189678 323 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.29□□□□□ -1.56
Sox9Q04887 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Gm43370-201ENSMUST00000196437 284 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.29□□□□□ -1.56
Sox9Q04887 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sox9Q04887 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.29□□□□□ -1.56
Sox9Q04887 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Gm7034-201ENSMUST00000218638 645 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm6988-201ENSMUST00000222676 375 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.29□□□□□ -1.56
Sox9Q04887 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sox9Q04887 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Sox9Q04887 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Sox9Q04887 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sox9Q04887 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm14793-201ENSMUST00000118739 311 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm11196-201ENSMUST00000119052 395 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm15206-201ENSMUST00000119143 454 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm15060-201ENSMUST00000119550 948 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm11790-201ENSMUST00000119569 455 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm14837-201ENSMUST00000119688 206 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm7916-201ENSMUST00000120325 456 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.28□□□□□ -1.56
Sox9Q04887 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Sox9Q04887 Gm23228-201ENSMUST00000157296 270 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms