Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm24709-201ENSMUST00000104123 132 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm11971-201ENSMUST00000117715 288 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm15333-201ENSMUST00000118825 364 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm12803-201ENSMUST00000118907 821 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm14874-201ENSMUST00000118995 438 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm8545-201ENSMUST00000120692 801 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm15022-201ENSMUST00000122074 746 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm25433-201ENSMUST00000158283 286 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm23408-201ENSMUST00000158523 265 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm15838-201ENSMUST00000161575 180 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm18343-201ENSMUST00000172802 604 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm22655-201ENSMUST00000174949 96 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm22242-201ENSMUST00000175224 118 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm24949-201ENSMUST00000183609 215 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm27640-201ENSMUST00000184580 147 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm29134-201ENSMUST00000186579 126 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm6693-201ENSMUST00000189583 813 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm28241-201ENSMUST00000190916 235 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm45146-201ENSMUST00000207108 221 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 AC124709.3-201ENSMUST00000227294 171 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm8526-201ENSMUST00000079153 475 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm24037-201ENSMUST00000082871 180 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.85□□□□□ -1.63
Pcdh1F7BJK1 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm15975-201ENSMUST00000122385 1402 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm26376-201ENSMUST00000104784 110 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm11784-201ENSMUST00000118568 474 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm14517-201ENSMUST00000119040 337 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm12007-201ENSMUST00000120978 597 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm23206-201ENSMUST00000122720 184 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm25342-201ENSMUST00000157459 122 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm25365-201ENSMUST00000158852 121 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm3030-201ENSMUST00000163410 516 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm20415-201ENSMUST00000172877 423 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm22307-201ENSMUST00000180019 107 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms