Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm8600-201ENSMUST00000186320 905 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Gm9845-201ENSMUST00000056409 598 ntBASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Col6a3E9PWQ3 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm22782-201ENSMUST00000104082 132 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm14518-201ENSMUST00000117351 542 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm24537-201ENSMUST00000157950 102 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm2676-201ENSMUST00000207279 606 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm5762-201ENSMUST00000119204 258 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm18692-201ENSMUST00000193047 511 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm36985-201ENSMUST00000195595 379 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.54□□□□□ -1.84
Col6a3E9PWQ3 Gm24289-201ENSMUST00000157629 135 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm43005-201ENSMUST00000199015 648 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm45222-201ENSMUST00000207029 4307 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm23746-201ENSMUST00000104229 125 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm5060-201ENSMUST00000120072 599 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm45378-201ENSMUST00000211063 2711 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 AC134333.1-201ENSMUST00000204536 944 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col6a3E9PWQ3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms