Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm15786-201ENSMUST00000121079 450 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm23501-201ENSMUST00000157744 256 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm26352-201ENSMUST00000158223 125 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Mir6541-201ENSMUST00000183649 110 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm28625-201ENSMUST00000188309 205 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm18427-201ENSMUST00000195422 515 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm43406-201ENSMUST00000200356 334 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm7990-201ENSMUST00000212126 593 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm18541-201ENSMUST00000215935 538 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 AC154506.1-201ENSMUST00000225178 621 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm23626-201ENSMUST00000082458 133 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Col6a1Q04857 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.05□□□□□ -1.44
Col6a1Q04857 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a1Q04857 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Col6a1Q04857 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm12186-201ENSMUST00000119050 945 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm11719-201ENSMUST00000119399 351 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm14392-201ENSMUST00000120332 401 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm11438-201ENSMUST00000121582 189 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm25293-201ENSMUST00000122792 285 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm16345-201ENSMUST00000146065 158 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm8121-201ENSMUST00000153583 499 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm3170-201ENSMUST00000168753 850 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm24103-201ENSMUST00000174930 77 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm3348-201ENSMUST00000177813 850 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm21850-201ENSMUST00000179792 359 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm28151-201ENSMUST00000189404 951 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm19029-201ENSMUST00000189923 564 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm34176-201ENSMUST00000192621 474 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm43779-201ENSMUST00000196691 829 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm44923-201ENSMUST00000206673 85 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm17999-201ENSMUST00000211568 542 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm5023-201ENSMUST00000217442 587 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Gm7753-201ENSMUST00000221007 867 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Col6a1Q04857 AC170086.1-201ENSMUST00000225190 497 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Col6a1Q04857 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.04□□□□□ -1.44
Col6a1Q04857 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Col6a1Q04857 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col6a1Q04857 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.03□□□□□ -1.44
Col6a1Q04857 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a1Q04857 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm23274-201ENSMUST00000104056 130 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Gm10936-201ENSMUST00000105264 252 ntBASIC6.03□□□□□ -1.44
Col6a1Q04857 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms