Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ap4s1Q9WVL1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.77■□□□□ 0.28
Ap4s1Q9WVL1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ap4s1Q9WVL1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Ap4s1Q9WVL1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ap4s1Q9WVL1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ap4s1Q9WVL1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ap4s1Q9WVL1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Gm40848-201ENSMUST00000221998 324 ntBASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ap4s1Q9WVL1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ap4s1Q9WVL1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ap4s1Q9WVL1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms