Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col13a1Q9R1N9 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.83□□□□□ -0.03
Col13a1Q9R1N9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col13a1Q9R1N9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col13a1Q9R1N9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col13a1Q9R1N9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Mir6349-201ENSMUST00000184059 97 ntBASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.81□□□□□ -0.04
Col13a1Q9R1N9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col13a1Q9R1N9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col13a1Q9R1N9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms