Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.24■□□□□ 0.03
Nubp1Q9R060 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.24■□□□□ 0.03
Nubp1Q9R060 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nubp1Q9R060 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.23■□□□□ 0.03
Nubp1Q9R060 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.23■□□□□ 0.03
Nubp1Q9R060 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.23■□□□□ 0.03
Nubp1Q9R060 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Gm43514-201ENSMUST00000198852 424 ntBASIC15.23■□□□□ 0.03
Nubp1Q9R060 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nubp1Q9R060 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nubp1Q9R060 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Gm21559-201ENSMUST00000220638 855 ntBASIC15.22■□□□□ 0.03
Nubp1Q9R060 Gm8587-201ENSMUST00000076538 843 ntBASIC15.22■□□□□ 0.03
Nubp1Q9R060 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nubp1Q9R060 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp1Q9R060 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.21■□□□□ 0.03
Nubp1Q9R060 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nubp1Q9R060 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp1Q9R060 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp1Q9R060 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp1Q9R060 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp1Q9R060 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nubp1Q9R060 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Mir1668-201ENSMUST00000184114 107 ntBASIC15.2■□□□□ 0.02
Nubp1Q9R060 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.2■□□□□ 0.02
Nubp1Q9R060 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp1Q9R060 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.2■□□□□ 0.02
Nubp1Q9R060 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nubp1Q9R060 Gm45251-201ENSMUST00000209486 1465 ntBASIC15.2■□□□□ 0.02
Nubp1Q9R060 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.19■□□□□ 0.02
Nubp1Q9R060 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms