Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zc3h8Q9JJ48 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Mir7071-201ENSMUST00000184847 69 ntBASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Gm38027-201ENSMUST00000192315 235 ntBASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zc3h8Q9JJ48 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Gm24841-201ENSMUST00000158676 357 ntBASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Mir8112-201ENSMUST00000184382 131 ntBASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Gm30025-201ENSMUST00000218555 728 ntBASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zc3h8Q9JJ48 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Zc3h8Q9JJ48 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Zc3h8Q9JJ48 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zc3h8Q9JJ48 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zc3h8Q9JJ48 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zc3h8Q9JJ48 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms