Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 AL390719.1-204ENST00000412397 1219 ntBASIC23.8■■□□□ 1.4
RNF41Q9H4P4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 GABARAPL3-202ENST00000624044 1851 ntBASIC23.8■■□□□ 1.4
RNF41Q9H4P4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 HLA-G-202ENST00000376815 851 ntBASIC23.79■■□□□ 1.4
RNF41Q9H4P4 HLA-G-203ENST00000376818 1127 ntBASIC23.79■■□□□ 1.4
RNF41Q9H4P4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 UNC93B5-201ENST00000530315 699 ntBASIC23.79■■□□□ 1.4
RNF41Q9H4P4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 AL031963.3-201ENST00000606441 850 ntBASIC23.79■■□□□ 1.4
RNF41Q9H4P4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF41Q9H4P4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 KRT8P20-201ENST00000423953 1409 ntBASIC23.78■■□□□ 1.4
RNF41Q9H4P4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.78■■□□□ 1.4
RNF41Q9H4P4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF41Q9H4P4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.77■■□□□ 1.4
RNF41Q9H4P4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF41Q9H4P4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.39
RNF41Q9H4P4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 KRT8P17-201ENST00000453110 1448 ntBASIC23.76■■□□□ 1.39
RNF41Q9H4P4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF41Q9H4P4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
RNF41Q9H4P4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF41Q9H4P4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
RNF41Q9H4P4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.75■■□□□ 1.39
RNF41Q9H4P4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF41Q9H4P4 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF41Q9H4P4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF41Q9H4P4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms