Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim39Q9ESN2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim39Q9ESN2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim39Q9ESN2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim39Q9ESN2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim39Q9ESN2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Gm13148-201ENSMUST00000118892 745 ntBASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Gm12933-201ENSMUST00000120203 872 ntBASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trim39Q9ESN2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim39Q9ESN2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim39Q9ESN2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim39Q9ESN2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim39Q9ESN2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim39Q9ESN2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim39Q9ESN2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim39Q9ESN2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim39Q9ESN2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trim39Q9ESN2 Gm44487-201ENSMUST00000205145 325 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms