Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Idnk-204ENSMUST00000226010 1898 ntBASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Mbd3l1Q9D9H3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Mbd3l1Q9D9H3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mbd3l1Q9D9H3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Mbd3l1Q9D9H3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mbd3l1Q9D9H3 Gm9870-201ENSMUST00000063874 645 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms