Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chchd1Q9CQA6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Gm7332-201ENSMUST00000118351 454 ntBASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Gm9870-201ENSMUST00000063874 645 ntBASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Chchd1Q9CQA6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Gm27502-201ENSMUST00000183495 199 ntBASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chchd1Q9CQA6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.24□□□□□ -0.29
Chchd1Q9CQA6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chchd1Q9CQA6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chchd1Q9CQA6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chchd1Q9CQA6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms