Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf111Q99ML9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf111Q99ML9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf111Q99ML9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf111Q99ML9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Gm44549-201ENSMUST00000208351 577 ntBASIC16.95■□□□□ 0.3
Rnf111Q99ML9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf111Q99ML9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf111Q99ML9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf111Q99ML9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Gm2399-201ENSMUST00000104944 225 ntBASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.92■□□□□ 0.3
Rnf111Q99ML9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.92■□□□□ 0.3
Rnf111Q99ML9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms