Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx6-1Q99MA9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.33■□□□□ 0.21
Nkx6-1Q99MA9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx6-1Q99MA9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx6-1Q99MA9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Mir770-201ENSMUST00000103252 94 ntBASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx6-1Q99MA9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Gm28659-201ENSMUST00000188013 759 ntBASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx6-1Q99MA9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx6-1Q99MA9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Gm34391-201ENSMUST00000203706 907 ntBASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nkx6-1Q99MA9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms