Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.61■□□□□ 0.41
Cdk9Q99J95 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.61■□□□□ 0.41
Cdk9Q99J95 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk9Q99J95 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.59■□□□□ 0.41
Cdk9Q99J95 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk9Q99J95 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk9Q99J95 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.58■□□□□ 0.41
Cdk9Q99J95 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk9Q99J95 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk9Q99J95 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk9Q99J95 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.58■□□□□ 0.41
Cdk9Q99J95 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.58■□□□□ 0.4
Cdk9Q99J95 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Cdk9Q99J95 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk9Q99J95 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk9Q99J95 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdk9Q99J95 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk9Q99J95 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cdk9Q99J95 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk9Q99J95 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdk9Q99J95 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.57■□□□□ 0.4
Cdk9Q99J95 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.57■□□□□ 0.4
Cdk9Q99J95 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.57■□□□□ 0.4
Cdk9Q99J95 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdk9Q99J95 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk9Q99J95 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk9Q99J95 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdk9Q99J95 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdk9Q99J95 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms