Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col20a1Q923P0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Col20a1Q923P0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col20a1Q923P0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col20a1Q923P0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Gm7370-201ENSMUST00000219471 767 ntBASIC20.64■□□□□ 0.89
Col20a1Q923P0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col20a1Q923P0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Gm22697-201ENSMUST00000175194 63 ntBASIC20.63■□□□□ 0.89
Col20a1Q923P0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col20a1Q923P0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Gm23634-201ENSMUST00000175071 91 ntBASIC20.62■□□□□ 0.89
Col20a1Q923P0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.62■□□□□ 0.89
Col20a1Q923P0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col20a1Q923P0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.61■□□□□ 0.89
Col20a1Q923P0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col20a1Q923P0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col20a1Q923P0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.6■□□□□ 0.89
Col20a1Q923P0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col20a1Q923P0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.59■□□□□ 0.89
Col20a1Q923P0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Col20a1Q923P0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col20a1Q923P0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms