Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Gm30025-201ENSMUST00000218555 728 ntBASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdha11Q91Y19 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdha11Q91Y19 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdha11Q91Y19 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Pcdha11Q91Y19 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Gm38027-201ENSMUST00000192315 235 ntBASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdha11Q91Y19 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Gm24841-201ENSMUST00000158676 357 ntBASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdha11Q91Y19 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms