Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rprd1aQ8VDS4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rprd1aQ8VDS4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Rprd1aQ8VDS4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rprd1aQ8VDS4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Gm4974-201ENSMUST00000209974 875 ntBASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.97■□□□□ 0.47
Rprd1aQ8VDS4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Gm37055-201ENSMUST00000191866 133 ntBASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rprd1aQ8VDS4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rprd1aQ8VDS4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Timm23-208ENSMUST00000226683 750 ntBASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rprd1aQ8VDS4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rprd1aQ8VDS4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rprd1aQ8VDS4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms