Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chrna3Q8R4G9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chrna3Q8R4G9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chrna3Q8R4G9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.14■□□□□ 0.34
Chrna3Q8R4G9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chrna3Q8R4G9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Gm3375-201ENSMUST00000203929 796 ntBASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chrna3Q8R4G9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chrna3Q8R4G9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chrna3Q8R4G9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna3Q8R4G9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna3Q8R4G9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chrna3Q8R4G9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chrna3Q8R4G9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms