Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.67■□□□□ 0.42
Slf1Q8R3P9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slf1Q8R3P9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.65■□□□□ 0.42
Slf1Q8R3P9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Slf1Q8R3P9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slf1Q8R3P9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slf1Q8R3P9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.64■□□□□ 0.41
Slf1Q8R3P9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slf1Q8R3P9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Gm13234-201ENSMUST00000120010 747 ntBASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms