Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb7Q8CDY9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb7Q8CDY9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb7Q8CDY9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb7Q8CDY9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb7Q8CDY9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb7Q8CDY9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb7Q8CDY9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb7Q8CDY9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb7Q8CDY9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms